See: Description
Class | Description |
---|---|
Calculator |
Calculates the likelihood for different parameter values.
|
Calculator.SiteCalculator |
Calculates the likelihood of a single site.
|
ConfidenceInterval |
Used to calculate congfidence intervals for a parameter.
|
Likelihood |
Stores the results of a likelihood calculation.
|
Likelihood.NodeLikelihood |
Stores the results of a likelihood claculation for a single node in a tree.
|
Likelihood.RateLikelihood |
Stores the result of the likelihood calculations for a single site and
a single rate class.
|
Likelihood.SiteLikelihood |
Stored the result of a likelihood calculation for a single site
|
Probabilities |
Stores the values of each transition, frequency etc for one set of parameters.
|
Exception | Description |
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Likelihood.LikelihoodException |
Exception related to a likelihood calculation
|