Package Models

Provides classes for defing a phylogenetic model.

See:
          Description

Class Summary
Distributions Class to calculate stationary and quasi-stationary distributions
DNAModelFactory A factory for easing the creation of many standard DNA models
DuplicationModelFactory A factory for easing the creation of some simple gene-family models
Model Represents an evolutionary model.
RateCategory Represents a rate category of a phylogenetic model.
 

Enum Summary
Distributions.Calculation Enumeration of the different methods of calculating a distribution
RateCategory.FrequencyType Enumeration of the different ways of defining the root frequency
 

Exception Summary
Distributions.DistributionsException Exception for use there is a problem calculating a distribution
 

Package Models Description

Provides classes for defing a phylogenetic model. Includes a class to calculate statationary and quasi-station distributions.