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java.lang.ObjectAlignments.Site
Alignments.Alignment.UniqueSite
public class Alignment.UniqueSite
Used to represent a unique site in an alignment. Augments the normal site class with a count of how often the site occurs
Constructor Summary | |
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Alignment.UniqueSite(Site s,
int c)
Default constructor |
Method Summary | |
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int |
getCount()
Get the number of times the site occurs in the related alignment |
java.lang.String |
toString()
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Methods inherited from class Alignments.Site |
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equals, getAmbiguous, getCharacter, getInitialNodeLikelihoods, getNum, getRawCharacter, getSiteClass, getTaxa, hashCode, limitToTaxa, recode, recode |
Methods inherited from class java.lang.Object |
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clone, finalize, getClass, notify, notifyAll, wait, wait, wait |
Constructor Detail |
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public Alignment.UniqueSite(Site s, int c)
s
- The sitec
- How often the site occursMethod Detail |
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public int getCount()
public java.lang.String toString()
toString
in class Site
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