Uses of Class
Ancestors.AncestralJoint

Packages that use AncestralJoint
Ancestors Provides classed to calculate ancestral reconstruction. 
 

Uses of AncestralJoint in Ancestors
 

Subclasses of AncestralJoint in Ancestors
 class AncestralJointBB
          Class to perform joint ancestral reconstrion using the method of Pupko 2002 slightly modified
 class AncestralJointDP
          Class to perform joint ancestral reconstrion using the method of Pupko 2000
 

Methods in Ancestors that return AncestralJoint
static AncestralJoint AncestralJoint.newInstance(java.util.Map<java.lang.String,Model> m, Alignment a, Tree t)
          Returns an object of this class that can be used for joint reconstruction.
static AncestralJoint AncestralJoint.newInstance(Model m, Alignment a, Tree t)
          Returns an object of this class that can be used for joint reconstruction.