NxsTaxaBlockAPI Member List

This is the complete list of members for NxsTaxaBlockAPI, including all inherited members.
ActivateTaxa(const std::set< unsigned > &)=0NxsTaxaBlockAPI [pure virtual]
ActivateTaxon(unsigned)=0NxsTaxaBlockAPI [pure virtual]
AddTaxonLabel(const std::string &s)=0NxsTaxaBlockAPI [pure virtual]
ChangeTaxonLabel(unsigned i, NxsString s)=0NxsTaxaBlockAPI [pure virtual]
CharLabelToNumber(NxsString s) NCL_COULD_BE_CONSTNxsBlock [virtual]
CloneBlock(NxsBlockMapper &memo) const NxsBlock [virtual]
DemandEquals(NxsToken &token, const char *contextString) const NxsBlock [inline, protected]
DemandIsAtEquals(NxsToken &token, const char *contextString) const NxsBlock [protected]
DemandPositiveInt(NxsToken &token, const char *contextString) const NxsBlock [protected]
Disable()NxsBlock
Enable()NxsBlock
FindTaxon(const NxsString &label) const =0NxsTaxaBlockAPI [pure virtual]
GenerateNxsException(NxsToken &token, const char *message=NULL) const NxsBlock [protected]
GenerateUnexpectedTokenNxsException(NxsToken &token, const char *expected=NULL) const NxsBlock [protected]
GetAllLabels() const NxsTaxaBlockAPI [virtual]
GetBlockIDCommandString() const NxsBlock [inline]
GetID() const NxsBlock
GetImpliedBlocks()NxsBlock [virtual]
GetImpliedBlocksConst() const NxsBlock [virtual]
GetIndicesFromSetOrAsNumber(const std::string &label, NxsUnsignedSet *inds, const NxsUnsignedSetMap &itemSets, const unsigned maxInd, const char *itemType)NxsLabelToIndicesMapper [protected, static]
GetIndicesFromSets(const std::string &label, NxsUnsignedSet *inds, const NxsUnsignedSetMap &itemSets)NxsLabelToIndicesMapper [protected, static]
GetMaxTaxonLabelLength()=0NxsTaxaBlockAPI [pure virtual]
GetNexus() const NxsBlock [inline]
GetNTax() const =0NxsTaxaBlockAPI [pure virtual]
GetNTaxTotal() const =0NxsTaxaBlockAPI [pure virtual]
GetNumActiveTaxa() const =0NxsTaxaBlockAPI [pure virtual]
GetNumTaxonLabels() const =0NxsTaxaBlockAPI [pure virtual]
GetTaxonLabel(unsigned i) const =0NxsTaxaBlockAPI [pure virtual]
HandleBasicBlockCommands(NxsToken &token)NxsBlock [protected]
HandleBlockIDCommand(NxsToken &token)NxsBlock [virtual]
HandleEndblock(NxsToken &token)NxsBlock [virtual]
HandleLinkCommand(NxsToken &token)NxsBlock [virtual]
HandleTaxLabels(NxsToken &token)=0NxsTaxaBlockAPI [pure virtual]
HandleTitleCommand(NxsToken &token)NxsBlock [virtual]
ImplementsLinkAPI() const NxsBlock
InactivateTaxa(const std::set< unsigned > &s)=0NxsTaxaBlockAPI [pure virtual]
InactivateTaxon(unsigned)=0NxsTaxaBlockAPI [pure virtual]
IsActiveTaxon(unsigned i) const =0NxsTaxaBlockAPI [pure virtual]
IsAlreadyDefined(const std::string &label)=0NxsTaxaBlockAPI [pure virtual]
IsEmpty() NCL_COULD_BE_CONSTNxsBlock
IsEnabled() NCL_COULD_BE_CONSTNxsBlock
IsUserSupplied() NCL_COULD_BE_CONSTNxsBlock
NxsBlock()NxsBlock
Read(NxsToken &token)NxsBlock [protected, virtual]
Report(std::ostream &out) NCL_COULD_BE_CONSTNxsBlock [virtual]
Reset()NxsBlock [virtual]
SetImplementsLinkAPI(bool v)NxsBlock
SetNexus(NxsReader *nxsptr)NxsBlock [inline, virtual]
SetNtax(unsigned n)=0NxsTaxaBlockAPI [pure virtual]
SkippingCommand(NxsString commandName)NxsBlock [virtual]
TaxLabelToNumber(const std::string &label) const =0NxsTaxaBlockAPI [pure virtual]
TaxonLabelToNumber(NxsString s) const NxsBlock [virtual]
WriteAsNexus(std::ostream &out) const NxsBlock [virtual]
WriteLinkCommand(std::ostream &out) const NxsBlock [virtual]
WriteTaxLabelsCommand(std::ostream &out) const =0NxsTaxaBlockAPI [pure virtual]
~NxsBlock()NxsBlock [virtual]
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Generated on Mon Mar 29 16:37:13 2010 for NCL by  doxygen 1.6.3