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Siler CD, Oaks JR, Esselstyn JA, Diesmos AC, Brown RM.  2010.  Phylogeny and biogeography of Philippine bent-toed geckos (Gekkonidae: Cyrtodactylus) contradict a prevailing model of Pleistocene diversification. Molecular Phylogenetics and Evolution. ::inpress.
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Sukumaran J, Yaakob N, Yong D.  2006.  The herpetofauna of the Southeast Pahang peat-swamp forests. Hamadryad. 30:75–91.
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Sukumaran J, Das I, Haas A.  2006.  A synopsis of bioacoustic studies of Anuran amphibians of Borneo. Herpetological Review. 37:288–293.
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Sukumaran J, Holder MT.  2011.  Ginkgo: spatially-explicit simulator of complex phylogeographic histories. Molecular Ecology Resources. 11(2):364-369.
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Sukumaran J, Linkem CW.  2009.  Choice of topology estimators in Bayesian phylogenetic analysis. Molecular Biology and Evolution. 26:1–3.
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Sukumaran J, Holder MT.  2010.  DendroPy: A Python library for phylogenetic computing. Bioinformatics. 26:1569-1571.
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Sukumaran J.  2002.  The amphibian fauna of a forested area in Temengor, Northern Peninsular Malaysia. Hamadryad. 27:1–10.
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The Holder Lab is part of the Department of Ecology and Evolutionary Biology at KU