One of the first steps is to collect published phylogenies to include in the first draft tree of life. We are doing this using a public Mendeley group.

Adding publications to the list

The first step is to create a Mendeley account, if you don't already have one. Then, join the OpenTree Mendeley group. There are a few ways to add papers to the group:

Tagging papers if data available

We can only include a published phylogeny in the draft tree of life if the data (tree and alignment files) is available. We are using a couple of tags to track data availability. Feel free to use other tags, but please document how you are using them.

Metadata about trees


Pilot project in angiosperms

We've done a pilot project collecting publications, data sets and metadata about angiosperm phylogenies. 21 papers focused on angiosperm framework were used to search for trees, data sets, upload to Mendeley, and compile basic information: citation; Supermatrix vs supertree?; method if matrix (MP, ML, Bayesian); BS values given? Comments if appropriate—e.g., "best phylogenetic tree for this clade"; “multiple trees—which one to use?”.

Basic summary


Some problems noted