NxsDiscreteDatatypeMapper Member List

This is the complete list of members for NxsDiscreteDatatypeMapper, including all inherited members.

DebugWriteMapperFields(std::ostream &out) const	NxsDiscreteDatatypeMapper
EncodeNexusStateString(const std::string &stateAsNexus, NxsToken &token, const unsigned taxInd, const unsigned charInd, const NxsDiscreteStateRow *firstTaxonRow, const NxsString &nameStr)	NxsDiscreteDatatypeMapper	[inline]
GetHighestStateCode() const	NxsDiscreteDatatypeMapper	[inline]
GetNumStateCodes() const	NxsDiscreteDatatypeMapper	[inline]
GetOneStateForCode(NxsDiscreteStateCell stateCode, unsigned stateIndex) const	NxsDiscreteDatatypeMapper	[inline]
GetStateCodeStored(char currChar) const	NxsDiscreteDatatypeMapper	[inline]
GetStateSetForCode(NxsDiscreteStateCell stateCode) const	NxsDiscreteDatatypeMapper	[inline]
GetStateVectorForCode(NxsDiscreteStateCell stateCode) const	NxsDiscreteDatatypeMapper	[inline]
IsPolymorphic(NxsDiscreteStateCell stateCode) const	NxsDiscreteDatatypeMapper
IsSemanticallyEquivalent(const NxsDiscreteDatatypeMapper &other) const	NxsDiscreteDatatypeMapper
NxsDiscreteDatatypeMapper()	NxsDiscreteDatatypeMapper
NxsDiscreteDatatypeMapper(NxsCharactersBlock::DataTypesEnum datatypeE, bool hasGaps)	NxsDiscreteDatatypeMapper
NxsDiscreteDatatypeMapper(NxsCharactersBlock::DataTypesEnum datatype, const std::string &symbols, char missingChar, char gapChar, char matchChar, bool respectCase, const std::map< char, NxsString > &extraEquates)	NxsDiscreteDatatypeMapper
PositionInSymbols(const char currChar) const	NxsDiscreteDatatypeMapper
StateCodeForStateSet(const std::set< NxsDiscreteStateCell > &, const bool isPolymorphic, const bool addToLookup, const char symbol)	NxsDiscreteDatatypeMapper
StateCodeToNexusString(NxsDiscreteStateCell, bool demandSymbols=true) const	NxsDiscreteDatatypeMapper	[inline]
WasRestrictionDataype() const	NxsDiscreteDatatypeMapper	[inline]
WriteStateCodeAsNexusString(std::ostream &out, NxsDiscreteStateCell scode, bool demandSymbols=true) const	NxsDiscreteDatatypeMapper