, including all inherited members.
| AddNewPartition(const std::string &label, const NxsPartition &inds) | NxsTreesBlock | [virtual] |
| BriefReport(NxsString &s) NCL_COULD_BE_CONST | NxsTreesBlock | [virtual] |
| CharLabelToNumber(NxsString s) NCL_COULD_BE_CONST | NxsBlock | [virtual] |
| CloneBlock(NxsBlockMapper &memo) const | NxsBlock | [virtual] |
| constructingTaxaBlock | NxsTreesBlock | [protected] |
| DemandEquals(NxsToken &token, const char *contextString) const | NxsBlock | [inline, protected] |
| DemandIsAtEquals(NxsToken &token, const char *contextString) const | NxsBlock | [protected] |
| DemandPositiveInt(NxsToken &token, const char *contextString) const | NxsBlock | [protected] |
| Disable() | NxsBlock | |
| Enable() | NxsBlock | |
| GenerateNxsException(NxsToken &token, const char *message=NULL) const | NxsBlock | [protected] |
| GenerateUnexpectedTokenNxsException(NxsToken &token, const char *expected=NULL) const | NxsBlock | [protected] |
| GetBlockIDCommandString() const | NxsBlock | [inline] |
| GetBlockName() const | NxsTreesBlock | [inline, virtual] |
| GetFullTreeDescription(unsigned i) const | NxsTreesBlock | |
| GetID() const | NxsBlock | |
| GetImpliedBlocks() | NxsTreesBlock | [inline, virtual] |
| GetImpliedBlocksConst() const | NxsBlock | [virtual] |
| GetIndicesForLabel(const std::string &label, NxsUnsignedSet *inds) const | NxsTreesBlock | [virtual] |
| GetIndicesFromSetOrAsNumber(const std::string &label, NxsUnsignedSet *inds, const NxsUnsignedSetMap &itemSets, const unsigned maxInd, const char *itemType) | NxsLabelToIndicesMapper | [protected, static] |
| GetIndicesFromSets(const std::string &label, NxsUnsignedSet *inds, const NxsUnsignedSetMap &itemSets) | NxsLabelToIndicesMapper | [protected, static] |
| GetNexus() const | NxsBlock | [inline] |
| GetNumDefaultTree() | NxsTreesBlock | |
| GetNumTrees() | NxsTreesBlock | |
| GetNumTrees() const | NxsTreesBlock | |
| GetProcessAllTreesDuringParse() const | NxsTreesBlock | [inline] |
| GetTaxaLinkStatus() const | NxsTaxaBlockSurrogate | [inline] |
| GetTranslatedTreeDescription(unsigned i) | NxsTreesBlock | |
| GetTreeDescription(unsigned i) | NxsTreesBlock | |
| GetTreeName(unsigned i) | NxsTreesBlock | |
| HandleBasicBlockCommands(NxsToken &token) | NxsBlock | [protected] |
| HandleBlockIDCommand(NxsToken &token) | NxsBlock | [virtual] |
| HandleEndblock(NxsToken &token) | NxsBlock | [virtual] |
| HandleLinkCommand(NxsToken &token) | NxsTreesBlock | [inline, virtual] |
| HandleTaxLabels(NxsToken &token) | NxsTaxaBlockSurrogate | [protected, virtual] |
| HandleTitleCommand(NxsToken &token) | NxsBlock | [virtual] |
| ImplementsLinkAPI() const | NxsBlock | |
| IsActiveTaxon(unsigned i) const | NxsTaxaBlockSurrogate | [inline, virtual] |
| IsDefaultTree(unsigned i) | NxsTreesBlock | |
| IsEmpty() NCL_COULD_BE_CONST | NxsBlock | |
| IsEnabled() NCL_COULD_BE_CONST | NxsBlock | |
| IsRootedTree(unsigned i) | NxsTreesBlock | |
| IsUserSupplied() NCL_COULD_BE_CONST | NxsBlock | |
| NxsBlock() | NxsBlock | |
| NxsTreesBlock(NxsTaxaBlockAPI *tb) | NxsTreesBlock | |
| processAllTreesDuringParse | NxsTreesBlock | [protected] |
| Read(NxsToken &token) | NxsTreesBlock | [protected, virtual] |
| ReplaceTaxaBlockPtr(NxsTaxaBlockAPI *tb) | NxsTreesBlock | |
| Report(std::ostream &out) NCL_COULD_BE_CONST | NxsTreesBlock | [virtual] |
| Reset() | NxsTreesBlock | [virtual] |
| SetImplementsLinkAPI(bool v) | NxsBlock | |
| SetNexus(NxsReader *nxsptr) | NxsTreesBlock | [inline, virtual] |
| SetProcessAllTreesDuringParse(bool s) | NxsTreesBlock | [inline] |
| setValidationCallbacks(ProcessedTreeValidationFunction func, void *blob) | NxsTreesBlock | [inline] |
| SkippingCommand(NxsString commandName) | NxsBlock | [virtual] |
| TaxonLabelToNumber(NxsString s) const | NxsBlock | [virtual] |
| TreeLabelToNumber(const std::string &name) const | NxsTreesBlock | |
| trees | NxsTreesBlock | [mutable, protected] |
| WriteAsNexus(std::ostream &out) const | NxsTreesBlock | [virtual] |
| writeFromNodeEdgeDataStructure | NxsTreesBlock | [protected] |
| WriteLinkCommand(std::ostream &out) const | NxsTreesBlock | [inline, virtual] |
| ~NxsBlock() | NxsBlock | [virtual] |
| ~NxsTreesBlock() | NxsTreesBlock | [virtual] |
1.6.3
