Uses of Class
Likelihood.SiteLikelihood.RateLikelihood

Packages that use SiteLikelihood.RateLikelihood

Package	Description
Likelihood	Provides classes for calculating the likelihood of a tree given a model and an alignment.

Uses of SiteLikelihood.RateLikelihood in Likelihood

Methods in Likelihood that return SiteLikelihood.RateLikelihood

Modifier and Type	Method and Description
SiteLikelihood.RateLikelihood	SiteLikelihood.getRateLikelihood(RateCategory rate) Get the likelihood for a single rate class

Constructor parameters in Likelihood with type arguments of type SiteLikelihood.RateLikelihood

Constructor and Description
SiteLikelihood(java.util.Map<RateCategory,SiteLikelihood.RateLikelihood> rateLikelihoods, Probabilities P) Default constructor