Models

Enum DNAModelFactory.DNAModel

java.lang.Object

java.lang.Enum<DNAModelFactory.DNAModel>

Models.DNAModelFactory.DNAModel

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<DNAModelFactory.DNAModel>

Enclosing class:

DNAModelFactory

public static enum DNAModelFactory.DNAModel
extends java.lang.Enum<DNAModelFactory.DNAModel>

Represents the various types of DNA models

Enum Constant Summary

Enum Constants

Enum Constant and Description
F81 Felsenstein 81 model
GTR General Time Reversible (GTR) model
HKY The HKY model
JC The Jukes-Cantor model
K2P The Kimura 2-parameter model

Method Summary

Methods

Modifier and Type	Method and Description
static DNAModelFactory.DNAModel	valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static DNAModelFactory.DNAModel[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

F81

public static final DNAModelFactory.DNAModel F81

Felsenstein 81 model

GTR

public static final DNAModelFactory.DNAModel GTR

General Time Reversible (GTR) model

HKY

public static final DNAModelFactory.DNAModel HKY

The HKY model

JC

public static final DNAModelFactory.DNAModel JC

The Jukes-Cantor model

K2P

public static final DNAModelFactory.DNAModel K2P

The Kimura 2-parameter model

Method Detail

values

public static DNAModelFactory.DNAModel[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (DNAModelFactory.DNAModel c : DNAModelFactory.DNAModel.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static DNAModelFactory.DNAModel valueOf(java.lang.String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

java.lang.IllegalArgumentException - if this enum type has no constant with the specified name

java.lang.NullPointerException - if the argument is null