PublicNexusReader

AddFactory AddReadAssumptionsBlock AddReadCharactersBlock AddReadDataBlock AddReadDistancesBlock AddReadTaxaBlock AddReadTreesBlock AddReadUnalignedBlock AddReadUnknownBlock ClearContent ClearUsedBlockList conversionOutputRecord DeleteBlocksFromFactories Execute GetAssumptionsBlock GetAssumptionsBlockTemplate GetCharactersBlock GetCharactersBlockTemplate GetDataBlockTemplate GetDistancesBlock GetDistancesBlockTemplate GetNumAssumptionsBlocks GetNumAssumptionsBlocks GetNumAssumptionsBlocks GetNumCharactersBlocks GetNumDistancesBlocks GetNumTaxaBlocks GetNumTreesBlocks GetNumUnalignedBlocks GetNumUnknownBlocks GetTaxaBlock GetTaxaBlockTemplate GetTreesBlock GetTreesBlockTemplate GetUnalignedBlock GetUnalignedBlockTemplate GetUnknownBlock GetUnknownBlockTemplate NEXUS_ASSUMPTIONS_BLOCK_BIT NEXUS_CHARACTERS_BLOCK_BIT NEXUS_DISTANCES_BLOCK_BIT NEXUS_SETS_BLOCK_BIT NEXUS_TREES_BLOCK_BIT NEXUS_UNALIGNED_BLOCK_BIT NEXUS_UNKNOWN_BLOCK_BIT NexusBlocksToRead parseFileOrThrow PostExecuteHook PublicNexusReader RegisterTaxa

NxsAssumptionsBlock * PublicNexusReader::GetAssumptionsBlock ( const NxsTaxaBlock *  taxa, unsigned  index   ) const Returns: a pointer to the NxsCharactersBlock with index Indexing starts at 0 and refers to the index in a list of NxsCharactersBlock objects that refer to the NxsTaxaBlock `taxa`. Thus, the index does not necessarily represent the position among ALL of the NxsDistancesBlock objects 0L will be returned if the index is out of range. Indices should be < the number returned by GetNumCharactersBlocks(taxa). If `taxa` is 0L, then the total block indexing scheme will refer to the total number of Assumptions blocks read. Definition at line 404 of file nxspublicblocks.cpp.