- GenerateNxsException()
: NxsBlock
- GenerateUnexpectedTokenNxsException()
: NxsBlock
- GetAlias()
: ScopedTwoDMatrix< T >
- GetAllDatatypeMappers()
: NxsCharactersBlock
- GetAllLabels()
: NxsTaxaBlockAPI
- GetAllowAugmentingOfSequenceSymbols()
: NxsCharactersBlock
- GetAllTitlesForBlock()
: NxsReader
- GetAssumptionsBlock()
: PublicNexusReader
- GetAssumptionsBlockTemplate()
: PublicNexusReader
- GetBlockIDCommandString()
: NxsBlock
- GetBlockName()
: NxsDistancesBlock
, NxsToken
, NxsTreesBlock
- GetBlockPriority()
: NxsReader
- GetBlockReaderForID()
: NxsDefaultPublicBlockFactory
, NxsCloneBlockFactory
, NxsBlockFactory
- GetBlocksFromLastExecuteInOrder()
: NxsReader
- GetCharactersBlock()
: PublicNexusReader
- GetCharactersBlockTemplate()
: PublicNexusReader
- GetCharBlockByTitle()
: NxsReader
- GetCharLabel()
: NxsCharactersBlock
- GetCharPartition()
: NxsAssumptionsBlock
- GetCharPartitionNames()
: NxsAssumptionsBlock
- GetCharSet()
: NxsAssumptionsBlock
- GetCharSetNames()
: NxsAssumptionsBlock
- GetComment()
: NxsToken
- GetContinuousValues()
: NxsCharactersBlock
- GetCurlyBracketedToken()
: NxsToken
- GetDataBlockTemplate()
: PublicNexusReader
- GetDataType()
: NxsUnalignedBlock
, NxsCharactersBlock
- GetDatatypeMapForMixedType()
: NxsCharactersBlock
- GetDatatypeName()
: NxsCharactersBlock
- GetDefaultCodonPosPartitionName()
: NxsCharactersBlock
- GetDefaultDoubleWeights()
: NxsTransformationManager
- GetDefaultIntWeights()
: NxsTransformationManager
- GetDefaultTypeName()
: NxsTransformationManager
- GetDefaultTypeSetName()
: NxsTransformationManager
- GetDefaultWeightSetName()
: NxsTransformationManager
- GetDefExSetName()
: NxsAssumptionsBlock
- GetDiscreteMatrixRow()
: NxsCharactersBlock
- GetDistance()
: NxsDistancesBlock
- GetDistancesBlock()
: PublicNexusReader
- GetDistancesBlockTemplate()
: PublicNexusReader
- GetDoubleQuotedToken()
: NxsToken
- GetDoubleWeights()
: NxsTransformationManager
- GetExcludedIndexSet()
: NxsCharactersBlock
- GetExSet()
: NxsAssumptionsBlock
- GetExSetNames()
: NxsAssumptionsBlock
- GetFileColumn()
: NxsToken
- GetFileLine()
: NxsToken
- GetFilePosition()
: NxsToken
- getFormatNames()
: MultiFormatReader
- GetFullTreeDescription()
: NxsTreesBlock
- GetGapModeSetting()
: NxsCharactersBlock
- GetGapSymbol()
: NxsCharactersBlock
- GetHighestStateCode()
: NxsDiscreteDatatypeMapper
- GetID()
: NxsBlock
- GetImpliedBlocks()
: NxsTreesBlock
, NxsUnalignedBlock
, NxsAssumptionsBlock
, NxsBlock
, NxsCharactersBlock
, NxsDistancesBlock
- GetImpliedBlocksConst()
: NxsBlock
- GetIndicesForLabel()
: NxsCharactersBlock
, NxsTaxaBlock
, NxsTreesBlock
- GetIndicesFromSetOrAsNumber()
: NxsLabelToIndicesMapper
- GetIndicesFromSets()
: NxsLabelToIndicesMapper
- GetInfo()
: NxsSimpleEdge
- GetInternalRepresentation()
: NxsCharactersBlock
, NxsUnalignedBlock
- GetIntType()
: NxsTransformationManager
- GetIntWeights()
: NxsTransformationManager
- GetItems()
: NxsCharactersBlock
- GetLastStoredBlockByID()
: NxsReader
- GetLastStoredCharactersBlock()
: NxsReader
- GetLastStoredTaxaBlock()
: NxsReader
- GetLastStoredTreesBlock()
: NxsReader
- GetMatchcharSymbol()
: NxsCharactersBlock
- GetMaximalStateSetOfColumn()
: NxsCharactersBlock
- GetMaxIndex()
: NxsTaxaBlock
- GetMaxObsNumStates()
: NxsCharactersBlock
- GetMaxTaxonLabelLength()
: NxsTaxaBlockAPI
, NxsTaxaBlock
- GetMissingSymbol()
: NxsCharactersBlock
, NxsDistancesBlock
, NxsUnalignedBlock
- GetName()
: NxsFullTreeDescription
- GetNamedStateSetOfColumn()
: NxsCharactersBlock
- GetNChar()
: NxsCharactersBlock
- GetNchar()
: NxsDistancesBlock
- GetNCharTotal()
: NxsCharactersBlock
- getNCLCatchesSignals()
: NxsReader
- GetNewick()
: NxsFullTreeDescription
- GetNextToken()
: NxsToken
- GetNexus()
: NxsBlock
- GetNTax()
: NxsTaxaBlockAPI
, NxsTaxaBlock
- GetNTaxTotal()
: NxsTaxaBlockAPI
, NxsTaxaBlock
, NxsUnalignedBlock
- GetNTaxWithData()
: NxsUnalignedBlock
- GetNumActiveChar()
: NxsCharactersBlock
- GetNumActiveTaxa()
: NxsTaxaBlockAPI
, NxsTaxaBlock
- GetNumAssumptionsBlocks()
: PublicNexusReader
- GetNumChar()
: NxsCharactersBlock
- GetNumCharactersBlocks()
: PublicNexusReader
- GetNumCharPartitions()
: NxsAssumptionsBlock
- GetNumCharSets()
: NxsAssumptionsBlock
- GetNumDefaultTree()
: NxsTreesBlock
- GetNumDistancesBlocks()
: PublicNexusReader
- GetNumEliminated()
: NxsCharactersBlock
- GetNumEquates()
: NxsCharactersBlock
, NxsUnalignedBlock
- GetNumExSets()
: NxsAssumptionsBlock
- GetNumIncludedChars()
: NxsCharactersBlock
- GetNumMatrixCols()
: NxsCharactersBlock
- GetNumMatrixRows()
: NxsUnalignedBlock
, NxsCharactersBlock
- GetNumObsStates()
: NxsCharactersBlock
- getNumSignalIntsCaught()
: NxsReader
- GetNumStateCodes()
: NxsDiscreteDatatypeMapper
- GetNumStates()
: NxsCharactersBlock
, NxsUnalignedBlock
- GetNumTaxaBlocks()
: PublicNexusReader
- GetNumTaxonLabels()
: NxsTaxaBlockAPI
, NxsTaxaBlock
- GetNumTaxSets()
: NxsAssumptionsBlock
- GetNumTrees()
: NxsTreesBlock
- GetNumTreesBlocks()
: PublicNexusReader
- GetNumUnalignedBlocks()
: PublicNexusReader
- GetNumUnknownBlocks()
: PublicNexusReader
- GetNumUserEquates()
: NxsCharactersBlock
- GetNxsTransformationManagerRef()
: NxsCharactersBlock
- GetObsStates()
: NxsCharactersBlock
- GetOneStateForCode()
: NxsDiscreteDatatypeMapper
- GetOrderedType()
: NxsTransformationManager
- GetOriginalDataType()
: NxsUnalignedBlock
, NxsCharactersBlock
- GetOriginalTaxaBlock()
: NxsReader
- GetParentheticalToken()
: NxsToken
- GetProcessAllTreesDuringParse()
: NxsTreesBlock
- GetQuoted()
: NxsString
, NxsToken
- GetRealType()
: NxsTransformationManager
- GetSetOfAllUsedBlocks()
: NxsReader
- GetSimpleContinuousValue()
: NxsCharactersBlock
- GetStandardTypeNames()
: NxsTransformationManager
- GetState()
: NxsCharactersBlock
- GetStateCodeStored()
: NxsDiscreteDatatypeMapper
- GetStateLabel()
: NxsCharactersBlock
- GetStateSetForCode()
: NxsDiscreteDatatypeMapper
- GetStatesFormat()
: NxsCharactersBlock
- GetStateVectorForCode()
: NxsDiscreteDatatypeMapper
- GetSymbols()
: NxsCharactersBlock
, NxsUnalignedBlock
- GetTaxaBlock()
: PublicNexusReader
- GetTaxaBlockByTitle()
: NxsReader
- GetTaxaBlockFactory()
: NxsReader
- GetTaxaBlockTemplate()
: PublicNexusReader
- GetTaxaLinkStatus()
: NxsTaxaBlockSurrogate
- GetTaxonLabel()
: NxsCharactersBlock
, NxsTaxaBlockAPI
, NxsTaxaBlock
- GetTaxSet()
: NxsAssumptionsBlock
- GetTaxSetNames()
: NxsAssumptionsBlock
- GetToken()
: NxsToken
- GetTokenAsCStr()
: NxsToken
- GetTokenLength()
: NxsToken
- GetTokenReference()
: NxsToken
- GetTranslatedTreeDescription()
: NxsTreesBlock
- GetTreeDescription()
: NxsTreesBlock
- GetTreeName()
: NxsTreesBlock
- GetTreesBlock()
: PublicNexusReader
- GetTreesBlockByTitle()
: NxsReader
- GetTreesBlockTemplate()
: PublicNexusReader
- GetTreeTokens()
: NxsFullTreeDescription
- GetTriangle()
: NxsDistancesBlock
- GetTypeNames()
: NxsTransformationManager
- GetTypeSetNames()
: NxsTransformationManager
- GetUnalignedBlock()
: PublicNexusReader
- GetUnalignedBlockTemplate()
: PublicNexusReader
- GetUnknownBlock()
: PublicNexusReader
- GetUnknownBlockTemplate()
: PublicNexusReader
- GetUnorderedType()
: NxsTransformationManager
- GetUsedBlocks()
: NxsReader
- GetUsedBlocksInOrder()
: NxsReader
- GetUserTypeNames()
: NxsTransformationManager
- GetWeightForIndex()
: NxsTransformationManager
- GetWeightSetNames()
: NxsTransformationManager
Generated on Mon Mar 29 16:37:12 2010 for NCL by
1.6.3